####################################### 
By using this module, you agree to comply with the Rosetta license available at 
/n/app/rosetta/3.13/LICENSE.md or
https://harvardmed.atlassian.net/wiki/spaces/O2/pages/1995112452/Rosetta+License 
The Rosetta license states that: 
- the software can only be used for non-profit academic research. 
- you are not allowed to redistribute the software. 
- you should share your Rosetta results with other non-profit academic
researchers. 
- you must cite/acknowledge Rosetta and the Developers in your publications. 
- if you modify the software, Rosetta may make similar modifications, and you
won't sue them. 
####################################### 
core.init: Checking for fconfig files in pwd and ./rosetta/flags 
core.init: Rosetta version: rosetta.source.release-280 r280 2021.16+release.8ee4f02 8ee4f02ac5768a8a339ffada74cb0ff5f778b3e6 https://www.rosettacommons.org 2021-04-20T20:57:38.289184
core.init: command: relax.default.linuxgccrelease -scorefile relax.sc @flags -suffix 5
basic.random.init_random_generator: 'RNG device' seed mode, using '/dev/urandom', seed=167019769 seed_offset=0 real_seed=167019769
basic.random.init_random_generator: RandomGenerator:init: Normal mode, seed=167019769 RG_type=mt19937
core.init: Resolved executable path: /n/app/rosetta/3.13/source/build/src/release/linux/3.10/64/x86/gcc/4.8/default/relax.default.linuxgccrelease
core.init: Looking for database based on location of executable: /n/app/rosetta/3.13/database/
core.scoring.ScoreFunctionFactory: SCOREFUNCTION: ref2015
core.scoring.etable: Starting energy table calculation
core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: Finished calculating energy tables.
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBPoly1D.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBFadeIntervals.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/HBEval.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/DonStrength.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/ref2015_params/AccStrength.csv
core.chemical.GlobalResidueTypeSet: Finished initializing fa_standard residue type set.  Created 986 residue types
core.chemical.GlobalResidueTypeSet: Total time to initialize 1.36 seconds.
basic.io.database: Database file opened: scoring/score_functions/rama/fd/all.ramaProb
basic.io.database: Database file opened: scoring/score_functions/rama/fd/prepro.ramaProb
basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.all.txt
basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.gly.txt
basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.pro.txt
basic.io.database: Database file opened: scoring/score_functions/omega/omega_ppdep.valile.txt
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
core.scoring.P_AA: shapovalov_lib::shap_p_aa_pp_smooth_level of 1( aka low_smooth ) got activated.
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/shapovalov/10deg/kappa131/a20.prop
protocols.relax.RelaxScriptManager: Reading relax scripts list from database.
protocols.relax.RelaxScriptManager: Looking for MonomerRelax2019.txt
protocols.relax.RelaxScriptManager: ================== Reading script file: /n/app/rosetta/3.13/database/sampling/relax_scripts/MonomerRelax2019.txt ==================
protocols.relax.RelaxScriptManager: repeat %%nrepeats%%
protocols.relax.RelaxScriptManager: coord_cst_weight 1.0
protocols.relax.RelaxScriptManager: scale:fa_rep 0.040
protocols.relax.RelaxScriptManager: repack
protocols.relax.RelaxScriptManager: scale:fa_rep 0.051
protocols.relax.RelaxScriptManager: min 0.01
protocols.relax.RelaxScriptManager: coord_cst_weight 0.5
protocols.relax.RelaxScriptManager: scale:fa_rep 0.265
protocols.relax.RelaxScriptManager: repack
protocols.relax.RelaxScriptManager: scale:fa_rep 0.280
protocols.relax.RelaxScriptManager: min 0.01
protocols.relax.RelaxScriptManager: coord_cst_weight 0.0
protocols.relax.RelaxScriptManager: scale:fa_rep 0.559
protocols.relax.RelaxScriptManager: repack
protocols.relax.RelaxScriptManager: scale:fa_rep 0.581
protocols.relax.RelaxScriptManager: min 0.01
protocols.relax.RelaxScriptManager: coord_cst_weight 0.0
protocols.relax.RelaxScriptManager: scale:fa_rep 1
protocols.relax.RelaxScriptManager: repack
protocols.relax.RelaxScriptManager: min 0.00001
protocols.relax.RelaxScriptManager: accept_to_best
protocols.relax.RelaxScriptManager: endrepeat
core.scoring.constraints.util: Constraint choice: thioether.cst
protocols.jd2.PDBJobInputter: Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: pushed ubrsp5-wbp2_OXT.pdb nstruct index 1
protocols.evaluation.ChiWellRmsdEvaluatorCreator: Evaluation Creator active ... 
protocols.jd2.PDBJobInputter: PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: filling pose from PDB ubrsp5-wbp2_OXT.pdb
core.import_pose.import_pose: File 'ubrsp5-wbp2_OXT.pdb' automatically determined to be of type PDB
core.io.pose_from_sfr.PoseFromSFRBuilder: Adding undetected upper terminus type to residue 630,  630 C
core.conformation.Residue: [ WARNING ] Residue::inter_residue_connection_partner: Invalid residue connection, returning BOGUS ID: this_rsd= CYX 395 connid= 3 partner_seqpos= 0
core.conformation.Residue: [ WARNING ] missing an atom: 395  V1  that depends on a nonexistent polymer connection! 
core.conformation.Residue: [ WARNING ]  --> generating it using idealized coordinates.
core.conformation.Conformation: [ WARNING ] Failed to find a residue connection for residue 395 with connection point 3
core.scoring.constraints.ConstraintsIO: read constraints from thioether.cst
core.scoring.constraints.ConstraintsIO: Read in 5 constraints
basic.io.database: Database file opened: scoring/score_functions/elec_cp_reps.dat
core.scoring.elec.util: Read 40 countpair representative atoms
core.pack.dunbrack.RotamerLibrary: shapovalov_lib_fixes_enable option is true.
core.pack.dunbrack.RotamerLibrary: shapovalov_lib::shap_dun10_smooth_level of 1( aka lowest_smooth ) got activated.
core.pack.dunbrack.RotamerLibrary: Binary rotamer library selected: /n/app/rosetta/3.13/database/rotamer/shapovalov/StpDwn_0-0-0/Dunbrack10.lib.bin
core.pack.dunbrack.RotamerLibrary: Using Dunbrack library binary file '/n/app/rosetta/3.13/database/rotamer/shapovalov/StpDwn_0-0-0/Dunbrack10.lib.bin'.
core.pack.dunbrack.RotamerLibrary: Dunbrack 2010 library took 0.3 seconds to load from binary
protocols.relax.FastRelax: CMD: repeat  540.636  0  0  0.55
protocols.relax.FastRelax: CMD: coord_cst_weight  540.636  0  0  0.55
protocols.relax.FastRelax: CMD: scale:fa_rep  167.215  0  0  0.022
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 17648 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -862.332  0  0  0.022
protocols.relax.FastRelax: CMD: scale:fa_rep  -826.066  0  0  0.02805
core.optimization.Minimizer: [ WARNING ] LBFGS MAX CYCLES 2000 EXCEEDED, BUT FUNC NOT CONVERGED!
protocols.relax.FastRelax: CMD: min  -2517.05  10.5766  10.5766  0.02805
protocols.relax.FastRelax: CMD: coord_cst_weight  -2517.05  10.5766  10.5766  0.02805
protocols.relax.FastRelax: CMD: scale:fa_rep  -1484.22  10.5766  10.5766  0.14575
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 15613 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1604.92  10.5766  10.5766  0.14575
protocols.relax.FastRelax: CMD: scale:fa_rep  -1544.22  10.5766  10.5766  0.154
protocols.relax.FastRelax: CMD: min  -2188.92  10.9325  10.9325  0.154
protocols.relax.FastRelax: CMD: coord_cst_weight  -2188.92  10.9325  10.9325  0.154
protocols.relax.FastRelax: CMD: scale:fa_rep  -1913.15  10.9325  10.9325  0.30745
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 15000 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1917.23  10.9325  10.9325  0.30745
protocols.relax.FastRelax: CMD: scale:fa_rep  -1895.89  10.9325  10.9325  0.31955
protocols.relax.FastRelax: CMD: min  -1988.87  10.9956  10.9956  0.31955
protocols.relax.FastRelax: CMD: coord_cst_weight  -1988.87  10.9956  10.9956  0.31955
protocols.relax.FastRelax: CMD: scale:fa_rep  -1760.37  10.9956  10.9956  0.55
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14233 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1760.9  10.9956  10.9956  0.55
protocols.relax.FastRelax: CMD: min  -1815.87  11.6026  11.6026  0.55
protocols.relax.FastRelax: MRP: 0  -1815.87  -1815.87  11.6026  11.6026  
protocols.relax.FastRelax: CMD: accept_to_best  -1815.87  11.6026  11.6026  0.55
protocols.relax.FastRelax: CMD: endrepeat  -1815.87  11.6026  11.6026  0.55
protocols.relax.FastRelax: CMD: coord_cst_weight  -1815.87  11.6026  11.6026  0.55
protocols.relax.FastRelax: CMD: scale:fa_rep  -2162.65  11.6026  11.6026  0.022
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 16996 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -2201.38  11.6026  11.6026  0.022
protocols.relax.FastRelax: CMD: scale:fa_rep  -2192.12  11.6026  11.6026  0.02805
protocols.relax.FastRelax: CMD: min  -2679.36  13.7719  13.7719  0.02805
protocols.relax.FastRelax: CMD: coord_cst_weight  -2679.36  13.7719  13.7719  0.02805
protocols.relax.FastRelax: CMD: scale:fa_rep  -1656.68  13.7719  13.7719  0.14575
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 15579 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1701.08  13.7719  13.7719  0.14575
protocols.relax.FastRelax: CMD: scale:fa_rep  -1635.13  13.7719  13.7719  0.154
protocols.relax.FastRelax: CMD: min  -2243.36  14.1345  14.1345  0.154
protocols.relax.FastRelax: CMD: coord_cst_weight  -2243.36  14.1345  14.1345  0.154
protocols.relax.FastRelax: CMD: scale:fa_rep  -1957.22  14.1345  14.1345  0.30745
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14808 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1959.11  14.1345  14.1345  0.30745
protocols.relax.FastRelax: CMD: scale:fa_rep  -1936.93  14.1345  14.1345  0.31955
protocols.relax.FastRelax: CMD: min  -2030.88  14.4315  14.4315  0.31955
protocols.relax.FastRelax: CMD: coord_cst_weight  -2030.88  14.4315  14.4315  0.31955
protocols.relax.FastRelax: CMD: scale:fa_rep  -1796.84  14.4315  14.4315  0.55
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14334 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1791.54  14.4315  14.4315  0.55
protocols.relax.FastRelax: CMD: min  -1846.57  14.444  14.444  0.55
protocols.relax.FastRelax: MRP: 1  -1846.57  -1846.57  14.444  14.444  
protocols.relax.FastRelax: CMD: accept_to_best  -1846.57  14.444  14.444  0.55
protocols.relax.FastRelax: CMD: endrepeat  -1846.57  14.444  14.444  0.55
protocols.relax.FastRelax: CMD: coord_cst_weight  -1846.57  14.444  14.444  0.55
protocols.relax.FastRelax: CMD: scale:fa_rep  -2198.6  14.444  14.444  0.022
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 17182 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -2232.38  14.444  14.444  0.022
protocols.relax.FastRelax: CMD: scale:fa_rep  -2225.21  14.444  14.444  0.02805
protocols.relax.FastRelax: CMD: min  -2697.53  16.0991  16.0991  0.02805
protocols.relax.FastRelax: CMD: coord_cst_weight  -2697.53  16.0991  16.0991  0.02805
protocols.relax.FastRelax: CMD: scale:fa_rep  -1660.3  16.0991  16.0991  0.14575
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 15793 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1712.12  16.0991  16.0991  0.14575
protocols.relax.FastRelax: CMD: scale:fa_rep  -1645.97  16.0991  16.0991  0.154
protocols.relax.FastRelax: CMD: min  -2251.76  16.8084  16.8084  0.154
protocols.relax.FastRelax: CMD: coord_cst_weight  -2251.76  16.8084  16.8084  0.154
protocols.relax.FastRelax: CMD: scale:fa_rep  -1962.99  16.8084  16.8084  0.30745
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14994 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1958.54  16.8084  16.8084  0.30745
protocols.relax.FastRelax: CMD: scale:fa_rep  -1936.02  16.8084  16.8084  0.31955
protocols.relax.FastRelax: CMD: min  -2032.5  17.3305  17.3305  0.31955
protocols.relax.FastRelax: CMD: coord_cst_weight  -2032.5  17.3305  17.3305  0.31955
protocols.relax.FastRelax: CMD: scale:fa_rep  -1796.8  17.3305  17.3305  0.55
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14401 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1792.77  17.3305  17.3305  0.55
protocols.relax.FastRelax: CMD: min  -1844.29  17.1578  17.1578  0.55
protocols.relax.FastRelax: MRP: 2  -1844.29  -1846.57  14.444  14.444  
protocols.relax.FastRelax: CMD: accept_to_best  -1844.29  17.1578  17.1578  0.55
protocols.relax.FastRelax: CMD: endrepeat  -1844.29  17.1578  17.1578  0.55
protocols.relax.FastRelax: CMD: coord_cst_weight  -1844.29  17.1578  17.1578  0.55
protocols.relax.FastRelax: CMD: scale:fa_rep  -2209.69  17.1578  17.1578  0.022
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 17203 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -2247.96  17.1578  17.1578  0.022
protocols.relax.FastRelax: CMD: scale:fa_rep  -2239.55  17.1578  17.1578  0.02805
protocols.relax.FastRelax: CMD: min  -2697.03  17.4433  17.4433  0.02805
protocols.relax.FastRelax: CMD: coord_cst_weight  -2697.03  17.4433  17.4433  0.02805
protocols.relax.FastRelax: CMD: scale:fa_rep  -1673.78  17.4433  17.4433  0.14575
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 15541 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1735.67  17.4433  17.4433  0.14575
protocols.relax.FastRelax: CMD: scale:fa_rep  -1671.39  17.4433  17.4433  0.154
protocols.relax.FastRelax: CMD: min  -2256.53  17.6707  17.6707  0.154
protocols.relax.FastRelax: CMD: coord_cst_weight  -2256.53  17.6707  17.6707  0.154
protocols.relax.FastRelax: CMD: scale:fa_rep  -1963.34  17.6707  17.6707  0.30745
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14841 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1964.1  17.6707  17.6707  0.30745
protocols.relax.FastRelax: CMD: scale:fa_rep  -1941.24  17.6707  17.6707  0.31955
protocols.relax.FastRelax: CMD: min  -2035.46  17.6566  17.6566  0.31955
protocols.relax.FastRelax: CMD: coord_cst_weight  -2035.46  17.6566  17.6566  0.31955
protocols.relax.FastRelax: CMD: scale:fa_rep  -1795.03  17.6566  17.6566  0.55
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14421 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1794.62  17.6566  17.6566  0.55
protocols.relax.FastRelax: CMD: min  -1855.43  17.7675  17.7675  0.55
protocols.relax.FastRelax: MRP: 3  -1855.43  -1855.43  17.7675  17.7675  
protocols.relax.FastRelax: CMD: accept_to_best  -1855.43  17.7675  17.7675  0.55
protocols.relax.FastRelax: CMD: endrepeat  -1855.43  17.7675  17.7675  0.55
protocols.relax.FastRelax: CMD: coord_cst_weight  -1855.43  17.7675  17.7675  0.55
protocols.relax.FastRelax: CMD: scale:fa_rep  -2214.09  17.7675  17.7675  0.022
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 17308 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -2248.39  17.7675  17.7675  0.022
protocols.relax.FastRelax: CMD: scale:fa_rep  -2240.54  17.7675  17.7675  0.02805
protocols.relax.FastRelax: CMD: min  -2718.22  18.4399  18.4399  0.02805
protocols.relax.FastRelax: CMD: coord_cst_weight  -2718.22  18.4399  18.4399  0.02805
protocols.relax.FastRelax: CMD: scale:fa_rep  -1713.15  18.4399  18.4399  0.14575
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 15605 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1760.12  18.4399  18.4399  0.14575
protocols.relax.FastRelax: CMD: scale:fa_rep  -1695.97  18.4399  18.4399  0.154
protocols.relax.FastRelax: CMD: min  -2272.23  18.2826  18.2826  0.154
protocols.relax.FastRelax: CMD: coord_cst_weight  -2272.23  18.2826  18.2826  0.154
protocols.relax.FastRelax: CMD: scale:fa_rep  -1981.3  18.2826  18.2826  0.30745
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14935 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1982.91  18.2826  18.2826  0.30745
protocols.relax.FastRelax: CMD: scale:fa_rep  -1960.25  18.2826  18.2826  0.31955
protocols.relax.FastRelax: CMD: min  -2058.76  18.0977  18.0977  0.31955
protocols.relax.FastRelax: CMD: coord_cst_weight  -2058.76  18.0977  18.0977  0.31955
protocols.relax.FastRelax: CMD: scale:fa_rep  -1824.69  18.0977  18.0977  0.55
core.pack.task: Packer task: initialize from command line() 
core.pack.pack_rotamers: built 14407 rotamers at 630 positions.
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
protocols.relax.FastRelax: CMD: repack  -1826.09  18.0977  18.0977  0.55
protocols.relax.FastRelax: CMD: min  -1879.02  17.938  17.938  0.55
protocols.relax.FastRelax: MRP: 4  -1879.02  -1879.02  17.938  17.938  
protocols.relax.FastRelax: CMD: accept_to_best  -1879.02  17.938  17.938  0.55
protocols.relax.FastRelax: CMD: endrepeat  -1879.02  17.938  17.938  0.55
protocols::checkpoint: Deleting checkpoints of FastRelax
protocols.jd2.JobDistributor: relax_ubrsp5-wbp2_OXT5_0001 reported success in 5067 seconds
protocols.jd2.JobDistributor: no more batches to process... 
protocols.jd2.JobDistributor: 1 jobs considered, 1 jobs attempted in 5068 seconds
basic.citation_manager.CitationManager: 
The following Rosetta modules were used during this run of Rosetta, and should be cited:

FastRelax Mover's citation(s):
Khatib F, Cooper S, Tyka MD, Xu K, Makedon I, Popovic Z, Baker D, and Players F.  (2011).  Algorithm discovery by protein folding game players.  Proc Natl Acad Sci USA 108(47):18949-53.  doi: 10.1073/pnas.1115898108.

Maguire JB, Haddox HK, Strickland D, Halabiya SF, Coventry B, Griffin JR, Pulavarti SVSRK, Cummins M, Thieker DF, Klavins E, Szyperski T, DiMaio F, Baker D, and Kuhlman B.  (2020).  Perturbing the energy landscape for improved packing during computational protein design..  Proteins "in press".  doi: 10.1002/prot.26030.


